Stream: shorthand
Topic: FHIR 101 Jupyter Notebook
Natasha Singh (Feb 03 2020 at 02:21):
Hey guys,
I've been working on a FHIR 101 Jupyter Notebook that teaches anyone without
any prior knowledge all of the basics for building a FHIR model and deploying
it to a server:
- Create and validate a FHIR data model for an entity
- Add/remove attributes to/from an entity in the model
- Create attributes which are constrained by ontologies
- Make entity attributes searchable in the FHIR server
- Deploy the FHIR data model into a FHIR server
- Load data into the FHIR server which conforms to the model
- Search for data in the FHIR server
https://github.com/kids-first/kf-model-fhir/pull/70
Its a total WORK IN PROGRESS :), but I thought I'd share it here in case it might help others.
Eventually I'll turn it into a static site so that you don't need Jupyter
Notebook to run it.
Cheers!
Natasha
Ward Weistra (Feb 03 2020 at 02:54):
Looks great, Nastasha. You could place a link to binder on your Github so people can easily spin up your Notebook in the cloud: https://mybinder.org/. Also, perhaps worth it to share this wider than just the #shorthand community.
David Hay (Feb 03 2020 at 03:11):
@Viet Nguyen - this might be of interest to you...
Viet Nguyen (Feb 03 2020 at 03:12):
Thanks!
Natasha Singh (Feb 03 2020 at 04:27):
Looks great, Nastasha. You could place a link to binder on your Github so people can easily spin up your Notebook in the cloud: https://mybinder.org/. Also, perhaps worth it to share this wider than just the #shorthand community.
Thanks @Ward Weistra binder looks awesome!
Natasha Singh (Feb 06 2020 at 20:23):
Hey guys,
I've moved the FHIR 101 Guide to its own repository: https://github.com/fhir-sci/fhir-101 and I've deployed it with Binder, so it's available online here: https://mybinder.org/v2/gh/fhir-sci/fhir-101/master?filepath=FHIR%20101%20-%20Practical%20Guide.ipynb
Feedback is very welcome!
Cheers!
Natasha
Last updated: Apr 12 2022 at 19:14 UTC
