FHIR Chat · IG publisher package failure · IG creation

Stream: IG creation

Topic: IG publisher package failure

view this post on Zulip Nick Robison (Nov 12 2019 at 14:25):

Hello,

We're trying to re-enable our IG build pipeline after the latest sets of changes; however, we're getting the following errors when running:

Publishing Content Failed: null                                                  (00:20.0050)
                                                                                 (00:20.0051)
Use -? to get command line help                                                  (00:20.0051)
                                                                                 (00:20.0052)
Stack Dump (for debugging):                                                      (00:20.0053)
java.lang.NullPointerException
    at org.hl7.fhir.utilities.cache.PackageCacheManager.addPackageToCache(PackageCacheManager.java:569)
    at org.hl7.fhir.igtools.publisher.Publisher.generate(Publisher.java:4045)
    at org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:772)
    at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:649)
    at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:6593)

We're using this version: FHIR IG Publisher Version 0.9.93-SNAPSHOT - Built 2019-11-11T15:19:07.322+11:00 - Git f882e9dbf8f7

I'm assuming it's an issue with our underlying IG specification (which hasn't changed in a while), but the error isn't very clear as to what I need to correct.

Cheers!

view this post on Zulip Lloyd McKenzie (Nov 12 2019 at 14:27):

@Grahame Grieve

view this post on Zulip Nagesh Bashyam (Nov 13 2019 at 08:01):

The latest IG publisher has fixed this for me.

view this post on Zulip Lloyd McKenzie (Nov 13 2019 at 13:07):

SDC is still failing because XML.xsd isn't published on build.fhir.org anymore. Is that a permanent change?

view this post on Zulip Kevin Power (Nov 13 2019 at 14:51):

I don't know if it is related, but the Genomics Reporting IG is also failing now - seems to happen on our profiles on Task. This built OK yesterday, and haven't made changes since.

Full Log:
http://build.fhir.org/ig/HL7/genomics-reporting/branches/master/build.log

     [java] Exception generating resource Task profiles::StructureDefinition/task-med-chg: null (00:37.0416)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.makeChoiceRows(ProfileUtilities.java:2925) (00:37.0417)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2873) (00:37.0417)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2865) (00:37.0417)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2865) (00:37.0417)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.generateTable(ProfileUtilities.java:2618) (00:37.0417)
     [java]    org.hl7.fhir.igtools.renderers.StructureDefinitionRenderer.snapshot(StructureDefinitionRenderer.java:351) (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generateOutputsStructureDefinition(Publisher.java:6048) (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generateHtmlOutputs(Publisher.java:5405) (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generate(Publisher.java:3973)        (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:772)         (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:649)          (00:37.0417)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:6610)            (00:37.0417)
...
     [java] Exception generating resource Task profiles::StructureDefinition/task-rec-followup: null (00:37.0467)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.makeChoiceRows(ProfileUtilities.java:2925) (00:37.0467)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2873) (00:37.0467)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2865) (00:37.0467)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.genElement(ProfileUtilities.java:2865) (00:37.0467)
     [java]    org.hl7.fhir.r5.conformance.ProfileUtilities.generateTable(ProfileUtilities.java:2618) (00:37.0467)
     [java]    org.hl7.fhir.igtools.renderers.StructureDefinitionRenderer.snapshot(StructureDefinitionRenderer.java:351) (00:37.0467)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generateOutputsStructureDefinition(Publisher.java:6048) (00:37.0467)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generateHtmlOutputs(Publisher.java:5405) (00:37.0467)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.generate(Publisher.java:3973)        (00:37.0467)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:772)         (00:37.0467)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:649)          (00:37.0468)
     [java]    org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:6610)            (00:37.0468)

view this post on Zulip Kevin Power (Nov 13 2019 at 14:53):

And less important, but am also seeing this today:

 [java] Sending Usage Stats to Server                                                    (00:40.0646)

[java] Submitting Usage Stats failed: Operation timed out (Connection timed out) (01:56.0147)

view this post on Zulip Grahame Grieve (Nov 13 2019 at 19:11):

@Lloyd McKenzie I had already fixed it when you raised that

view this post on Zulip Lloyd McKenzie (Nov 13 2019 at 19:47):

I triggered a new build this am and it still failed...

view this post on Zulip Grahame Grieve (Nov 13 2019 at 19:55):

the file that your code is looking for exists.

Last updated: Apr 12 2022 at 19:14 UTC


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