Stream: genomics
Topic: Montreal Connectathon 2019
Jamie Jones (May 04 2019 at 02:37):
Designated thread for questions and updates during the Connectathon (May 4-5 2019)! :working_on_it: !
Jamie Jones (May 04 2019 at 02:43):
Track orientation slides/quick links: https://tinyurl.com/cgconnectathon :octopus:
Jamie Jones (May 04 2019 at 14:24):
Google Doc for comments/questions/concerns that arise during the connectathon:
https://docs.google.com/document/d/1gMde-3lyzc1DST9vdyXmyeqLKmKLItd-l5Dv-RlqWD8/edit
Patrick Werner (May 04 2019 at 18:16):
how to validate with the java validator:
Download the current validator: http://wiki.hl7.org/index.php?title=Using_the_FHIR_Validator
Usage:
java -jar org.hl7.fhir.validation.cli-3.8.0-20190211.175101-5.jar path_to_your_example.xml -ig hl7.fhir.uv.genomics-reporting
Jamie Jones (May 04 2019 at 18:57):
oncology report example uploaded! http://build.fhir.org/ig/HL7/genomics-reporting/oncologyexamples-r4.html
Alexander Mankovich (May 05 2019 at 15:34):
overview of trio- or other multi-specimen/multi-individual genetic test: https://blueprintgenetics.com/tests/whole-exome-sequencing/whole-exome-family/
Jamie Jones (May 05 2019 at 18:46):
HSPC sandbox added supported for profiling and validation ! https://sandbox.hspconsortium.org
Last updated: Apr 12 2022 at 19:14 UTC
