Stream: genomics
Topic: Biomarkers sync-up
May Terry (Sep 24 2021 at 14:36):
Since we have no CGWG meetings next week (as customary in past WGMs), @Kevin Power and I were thinking of an interim meeting to further work through biomarkers representation prior to the following Monday CG modeling meeting. We plan on meeting on Friday, 10/1 at 3p ET/2p CT. Let me know if you'd like to attend and I'll extend an invite.
Kevin Power (Sep 24 2021 at 14:39):
Count me in, thanks May!
Jamie Jones (Sep 24 2021 at 14:41):
Biomark me as interested in attending
Bob Dolin (Sep 24 2021 at 14:44):
Please count me in @May Terry
Arthur Hermann (Sep 24 2021 at 16:09):
I would definitely like to attend!! :fireworks: :tada:
Patrick Werner (Sep 27 2021 at 08:02):
i'll try to make it
Bob Dolin (Sep 28 2021 at 17:52):
@Patrick Werner I'm just putting this here for reference - I know you were interested in HRD status, and it looks like Foundation's definition of HRD may differ a bit from some of the other examples we looked at. Source of picture is https://images.ctfassets.net/w98cd481qyp0/2pusoGEB1tZXWHYL3vlDnv/8392c7cfa1ebf36f9098c936324a73e3/F1CDx_NSCLC_CDx_Elevated_TMB.pdf
Bob Dolin (Sep 28 2021 at 17:53):
Patrick Werner (Sep 28 2021 at 17:54):
Thanks Bob!
Arthur Hermann (Sep 29 2021 at 19:57):
I had earlier uploaded this document to our google share - but want to post it here - it may be handy for our discussion on Friday.. Our NCAL Division has standardized on Strata for Oncology - they prepared this document for me quite a while ago (sorry for quality of image) - Again, may be helpful for this discussion or others.. Strata-Oncology-Report-for-NCAL.jpg
Bret H (Oct 06 2021 at 22:19):
was there a result to the synch up?
Jamie Jones (Oct 15 2021 at 16:14):
Are there any additional updates or materials we can go over for this on Monday? I recall the next steps were to review a proposal for standardized groups of elements that may be needed for the different classes of biomarkers.
Kevin Power (Oct 15 2021 at 16:55):
Tagging @May Terry in case she missed this.
Arthur Hermann (Oct 15 2021 at 18:28):
Jamie Jones said:
Are there any additional updates or materials we can go over for this on Monday? I recall the next steps were to review a proposal for standardized groups of elements that may be needed for the different classes of biomarkers.
In case it helps - I am attaching an image of notes from our last sessions (including some questions/comments from Bret H. Also link to notes zhira.jpg full notes here: https://docs.google.com/document/d/1FGCQRtxJKyHhnC1uB_t4sJZ9yXbLMGOqPXHPr5tSLLQ/edit#
May Terry (Oct 15 2021 at 19:57):
Still prepping materials for Monday so probably not beforehand. On a related note, I think that a couple of folks from CAP will be attending this meeting so I'm pretty much confirmed for the agenda topic.. :-)
Kevin Power said:
Tagging May Terry in case she missed this.
Last updated: Apr 12 2022 at 19:14 UTC
