FHIR Chat · Unable to find code system and profile us-core-observationre

Stream: implementers

Topic: Unable to find code system and profile us-core-observationre

Aditya (May 15 2019 at 14:16):

I am using custom validator (MyValidationSupport implements IValidationSupport) chained with DefaultValidationSupport. I am getting following error & warning while validating DiagnosticReport.

"issue": [
        {
            "severity": "warning",
            "code": "processing",
            "diagnostics": "Error unable to find code system http://loinc.org validating CodeableConcept",
            "location": [
                "DiagnosticReport.code"
            ]
        },
        {
            "severity": "error",
            "code": "processing",
            "diagnostics": "Unable to resolve the profile reference 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-observationresults'",
            "location": [
                "DiagnosticReport.result[1]"
            ]
        }

What am i missing ?

I am able to successfully validate AllergyIntolerance which means it is able to find profile http://hl7.org/fhir/us/core/StructureDefinition/us-core-allergyintolerance

Lloyd McKenzie (May 15 2019 at 14:24):

Does the standard validator work? (That might hint as to whether the issue is in the instances/IG somehow vs. the customized code.)

Aditya (May 15 2019 at 14:25):

Does the standard validator work? (That might hint as to whether the issue is in the instances/IG somehow vs. the customized code.)

It does and also the forge custom profiles work

Lloyd McKenzie (May 15 2019 at 14:27):

If the problem is with your customized code, it's going to be hard for the community to help much :(

Aditya (May 15 2019 at 14:30):

If the problem is with your customized code, it's going to be hard for the community to help much :(

I am not sure if it is though, because rest all profiles are working great. Below is the custom Validator just in case if there is any obvious flaw

package com.ecw.fhir.validator;

import java.util.HashMap;
import java.util.List;
import org.hl7.fhir.dstu3.hapi.ctx.IValidationSupport;
import org.hl7.fhir.dstu3.model.CodeSystem;
import org.hl7.fhir.dstu3.model.StructureDefinition;
import org.hl7.fhir.dstu3.model.ValueSet;
import org.hl7.fhir.instance.model.api.IBaseResource;
import ca.uhn.fhir.context.FhirContext;

public class MyValidationSupport implements IValidationSupport {

HashMap&lt;String, StructureDefinition&gt; definitionsMap = null;
List&lt;StructureDefinition&gt; definitions = null;

  public MyValidationSupport(List&lt;StructureDefinition&gt; definitions) {
      //Definitions list gotten from code above
      definitionsMap = new HashMap&lt;&gt;();
      this.definitions = definitions;
      definitions.forEach(def -&gt; definitionsMap.put(def.getUrl(), def));
  }

  @Override
  public ValueSet.ValueSetExpansionComponent expandValueSet(FhirContext theContext,     ValueSet.ConceptSetComponent theInclude) {
      return null;
  }

  @Override
  public List&lt;IBaseResource&gt; fetchAllConformanceResources(FhirContext theContext) {

      return null;
  }

  @Override
  public List&lt;StructureDefinition&gt; fetchAllStructureDefinitions(FhirContext theContext) {
      return definitions;
  }

  @Override
  public CodeSystem fetchCodeSystem(FhirContext theContext, String theSystem) {
      return null;
  }

  @Override
  public &lt;T extends IBaseResource&gt; T fetchResource(FhirContext theContext, Class&lt;T&gt; theClass, String theUri) {

      return (T) definitionsMap.get(theUri);
  }

  @Override
  public StructureDefinition fetchStructureDefinition(FhirContext theCtx, String theUrl) {
      return definitionsMap.get(theUrl);
  }

  @Override
  public boolean isCodeSystemSupported(FhirContext theContext, String theSystem) {
      return false;
  }

  @Override
  public CodeValidationResult validateCode(FhirContext theContext, String theCodeSystem, String theCode, String     theDisplay) {
      return null;
  }
}

Last updated: Apr 12 2022 at 19:14 UTC

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