Stream: implementers
Topic: SNOMED Browser view for FHIR valuesets
Cooper Thompson (Apr 24 2017 at 13:57):
Sorry if this is more of a SNOMED browser question than FHIR question, but for large valuesets (e.g. Device.kind), the FHIR valueset page lists the first 1000 values, with a reference to SNOMED for the full set. In the case of Device.kind, it says that the valueset is any concept that is-a 49062001. Is there a way to get a list of all those codes in one view in the SNOMED CT Browser (or other similar tool)? Just navigating to the Device node in the Taxonomy just shows the direct children, with an option to expand to see grandchildren. If an organization is actually going through the mapping exercise, having the fill list in a single view without having to expand all the child nodes would be useful.
Grahame Grieve (Apr 24 2017 at 13:58):
you need to hit a terminology server directly, and find one prepared to return that many values.
Grahame Grieve (Apr 24 2017 at 13:59):
if you set up your own, you can set it's limit to whatever.. (tx.fhir.org etc are limited to limit financial exposure)
Russ Hamm (Apr 25 2017 at 00:38):
The older CliniClue Browser can export the decendents of a Concept code in an XML structure down 6 or 7 levels. Not sexy but it works in a pinch if you just need a one off.
Michael Osborne (Apr 25 2017 at 14:16):
RF2Filter -- extract selected concepts from an RF2 distribution
Harold's SNOMED to OWL tool might help: https://github.com/hsolbrig/SNOMEDToOWL
Then you can look at it in Protege
Michael Lawley (May 23 2017 at 03:31):
@Cooper Thompson you can use http://ontoserver.csiro.au/stu3-latest to expand the valueset with URI http://snomed.info/sct?fhir_vs=isa/49062001
Last updated: Apr 12 2022 at 19:14 UTC
